Graduated at 2024
 | Yu-Xuan Liu Degree: Institute of Computer Science and Information Engineering Master Thesis: 透過公平微調策略消弭預訓練基礎模型於病理切片影像的癌症診斷偏見 Mitigating Bias of Pretrained Foundation Models via FAIR-Tuning for Histopathological Cancer Diagnosis E-mail: jennyliu.lyh@iir.csie.ncku.edu.tw |
 | Jia-Xin Wu Degree: Institute of Computer Science and Information Engineering Master Thesis: 基於大型語言模型的隱式約束資料增強與語義擴展在生物醫學關係萃取之應用 Leverage Large Language Models for Implicit Constrained Data Augmentation with Semantic Enrichment in Biomedical Relation Extraction E-mail: celia@iir.csie.ncku.edu.tw |
 | Ching-Chieh Tsao Degree: Institute of Computer Science and Information Engineering Master Thesis: 以時間對齊鬆弛策略改善深度學習在領域適應的應用 Unblocking Domain Adaptation through Relaxation of Temporal Alignment E-mail: chingchieh@iir.csie.ncku.edu.tw |
 | Zi-Hong Zhang Degree: Institute of Medical Informatics Master Thesis: 利用基於條件擴散模型與特徵對齊的框架進行專家級錐狀射束影像增強 DiffuCE: Expert-level CBCT Image Enhancement using a Novel Conditional Denoising Diffusion Model with Latent Alignment E-mail: lzh107u@iir.csie.ncku.edu.tw |
Graduated at 2023
 | Ling-Xuan Ying Degree: Institute of Computer Science and Information Engineering Master Thesis: 應用時間感知注意力網路進行透析中低血壓的個人化預測 Personalized Prediction of Intradialytic Hypotension Using Time-Aware Attention Networks E-mail: lingxuanying＠iir.csie.ncku.edu.tw |
 | Yu-Jei Zhou Degree: Institute of Computer Science and Information Engineering Master Thesis: 基於缺失感知的多變量時間序列模型預測慢性腎衰竭病患之未來病況 Missing-aware Multivariate Time Series Forecasting CKD Patients’ Future Disease Condition E-mail: zhou.yujei@iir.csie.ncku.edu.tw |
 | Chih-Heng Hsieh Degree: Institute of Computer Science and Information Engineering Master Thesis: 基於空間與時序關係在骨掃描影像上的病灶偵測及識別 Lesion Detection and Classification by Incorporating Spatial-Temporal Relations in Bone Scintigraphy Images E-mail: oliver8728＠iir.csie.ncku.edu.tw |
 | Yuan-Chi Cui Degree: Institute of Computer Science and Information Engineering Master Thesis: 基於特徵空間對齊整合多體學資料預測藥物反應 A latent alignment-based multi-omics approach to predict drug response E-mail: yuanchi＠iir.csie.ncku.edu.tw |
| Chun-Yen Chen Degree: Institute of Computer Science and Information Engineering Master Thesis: 以監督式對比學習提升組織病理學影像分類的公平性 Improving Fairness in Histopathology Image Classification via Supervised Contrastive Learning E-mail: stu93024@iir.csie.ncku.edu.tw |
Graduated at 2022
 | Yao-Kai Shih Degree: Institute of Computer Science and Information Engineering Master Thesis: 基於顯著圖引導之人工關節感染預測 Periprosthetic Joint Inflection Prediction by Leading with Saliency Map E-mail: ykshih88@iir.csie.ncku.edu.tw |
 | Jyue-An Chen Degree: Institute of Computer Science and Information Engineering Master Thesis: 基於師生模型之間的訊息差異進行域外偵測 Based on Information Discrepancy between Teacher-student Model for Out-of-domain Detection E-mail: gian1998@iir.csie.ncku.edu.tw |
 | Hsiang-Chun Chen Degree: Institute of Computer Science and Information Engineering Master Thesis: 利用先驗知識導向的生成對抗式網路增強醫療影像辨識品質:以錐束電腦斷層掃描為例 REGAN for Medical Image Diagnostic Quality Enhancement: A Case Study of CBCT E-mail: jjjunpersonal@iir.csie.ncku.edu.tw |
 | Yu-Wen Fang Degree: Institute of Computer Science and Information Engineering Master Thesis: 基於影像區塊之自適應聚合以提升x光之肺結節識別與定位效能 Improving Chest X-ray Lung Nodule Identification and Localization with Weakly Supervised Adaptive Patch Aggregation E-mail: jefffang07@iir.csie.ncku.edu.tw |
Graduated at 2021
 | Tsung-Hua Lee Degree: Institute of Computer Science and Information Engineering Master Thesis: 基於領域對抗師生學習網路從病理切片預測生物指標 A Domain Adversarial Teacher-Student Model for Biomarker Prediction using Histopathology E-mail: tsung@iir.csie.ncku.edu.tw |
 | Sina Abdollahi Degree: Institute of Computer Science and Information Engineering Ph.D. Thesis: 基於領域對抗師生學習網路從病理切片預測生物指標 Cancer Genomics Classification Using Deep Learning Models E-mail: sina@iir.csie.ncku.edu.tw |
 | Kun-Chi Kuo Degree: Institute of Computer Science and Information Engineering Master Thesis: 利用階層注意力模型在病理切片上預測大腸癌的基因變異 Predicting Colorectal Cancer Genetic Alteration from Histopathology with Hierarchical Attention Model E-mail: kuo23201199@iir.csie.ncku.edu.tw |
 | Li-Jin Huang Degree: Institute of Computer Science and Information Engineering Master Thesis: 基於深度學習之輕量化顱內出血自動分割與分類模型 A Lightweight Deep Learning-based Model for Intracranial Hemorrhage Automatic Segmentation and Classification E-mail: ftsim1216@iir.csie.ncku.edu.tw |
 | Pei-Chen Tsai Degree: Institute of Computer Science and Information Engineering Master Thesis: 基於病理切片預測大腸癌患者之預後 Predicting Colon Adenocarcinoma Prognosis by Histopathology E-mail: Sophie52052@iir.csie.ncku.edu.tw |
Graduated at 2020
 | Chi-Shiang Wang Degree: Institute of Computer Science and Information Engineering Ph.D. Thesis: 藉由注意力網路區塊模組驅動深度類神經網路與其應用 Attention Network Block Module Drives Deep Neural Network and Their Applications E-mail: hyaline0317@iir.csie.ncku.edu.tw |
 | Mu-Shiang Huang Degree: Institute of Computer Science and Information Engineering Master Thesis: 深度學習應用於心臟超音波辨識收縮異常心肌區域 Automated Recognition of Regional Wall Motion Abnoralities Through Deep Neural Network Interpretation of Transthoracic Echocardiography E-mail: cortdog0817@iir.csie.ncku.edu.tw |
 | Zhou-Yi Wu Degree: Institute of Computer Science and Information Engineering Master Thesis: 透過深度學習自動化心內膜脂肪以輔助分析心血管疾病之風險 Deep Learning-based Epicardial Adipose Tissue Quantification System for Cardiovascular Disease Risk Analysis E-mail: pjoyig@iir.csie.ncku.edu.tw |
 | Huang-Pin Chiu Degree: Institute of Computer Science and Information Engineering Master Thesis: 利用標記模型建置術後病人之放射治療臨床靶區自動化-以頭頸癌為例 Automatic Clinical Target Volume Segmentation on Postoperative Cancer Patients: Case Studies of Head and Neck Cancer E-mail: charlychiu@iir.csie.ncku.edu.tw |
 | Yi-Syuan Lin Degree: Institute of Computer Science and Information Engineering Master Thesis: 結合知識圖與屬性注意力機制以增強推薦系統的可解釋性 Integrate Knowledge Graph and Attribute Attention Mechanism to Achieve Explainable Recommendation System E-mail: linlisa0601@iir.csie.ncku.edu.tw |
 | Chong-Yao Ma Degree: Institute of Computer Science and Information Engineering Master Thesis: 藉由堆疊式注意力網路實現適應性情境感知之推薦系統 Adaptive Context-Aware Recommendation System via Stacked Attention Network E-mail: cyma@iir.csie.ncku.edu.tw |
Graduated at 2019
 | Chia-Jung Yang Degree: Institute of Computer Science and Information Engineering Ph.D. Thesis: 生物醫學領域中概念辨識的研究 以基因本體學為例 A Study on Concept Recognition in Biomedical Field Using Gene Ontology as an Example E-mail: jeroyang@iir.csie.ncku.edu.tw |
 | Bo-Syun Cheng Degree: Institute of Computer Science and Information Engineering Master Thesis: 發掘主題多樣性之個人化推薦系統 Discovering Topic Diversity in Personalized Recommendation System E-mail: k12s35h813g@iir.csie.ncku.edu.tw |
 | Chih-Jung Lee Degree: Institute of Computer Science and Information Engineering Master Thesis: 利用遺傳基因結構變異與免疫基因表現量預測癌症病人之預後 Using Deletion Structural Variants and Immune Response Gene Expression Profiles to Predict Clinical Outcome of Cancer Patients E-mail: elmolee822@iir.csie.ncku.edu.tw |
 | Ho-Chien Tsao Degree: Institute of Computer Science and Information Engineering Master Thesis: 基於BERT與增強式學習的多文件閱讀理解模型-建構健康知識領域問答系統 Multi-Document Reading Comprehension Based on BERT and Reinforcement Learning – Building a Health Knowledge Question Answering System E-mail: uabharuhi@iir.csie.ncku.edu.tw |
Graduated at 2018
 | Zi-Hsuan Hung Degree: Institute of Computer Science and Information Engineering Master Thesis: 餐廳推薦系統結合評論情緒分析 Restaurant Recommender System with Review Sentiment Analysis E-mail: samhung@iir.csie.ncku.edu.tw |
 | Chen-Ruei Liou Degree: Institute of Computer Science and Information Engineering Master Thesis: 透過生醫文獻探勘發現與分析測序基因集之特徵 Gene Panel Characteristics Discovery and Analysis by Biomedical Literature Mining E-mail: william0704@iir.csie.ncku.edu.tw |
 | Hung-Chun Chen Degree: Institute of Computer Science and Information Engineering Master Thesis: 運用注意力機制發掘使用者喜好之推薦系統 Discovering User Preference by Applying Attention Mechanism to Recommendation System E-mail: hcchen@iir.csie.ncku.edu.tw |
 | Hsiao-Yun Liu Degree: Institute of Computer Science and Information Engineering Master Thesis: 基於使用者喜好建立時序性個人化推薦系統 Modeling User Preference in Temporal Personalized Recommendation E-mail: hyliu@iir.csie.ncku.edu.tw |
 | Weng-Hang Cheang Degree: Institute of Computer Science and Information Engineering Master Thesis: 結合即時性事件嵌入隻興趣點推薦 Real-time Event Embedding for POI Recommendation E-mail: verca2510@iir.csie.ncku.edu.tw |
 | Quan-Zhan Wu Degree: Institute of Computer Science and Information Engineering Master Thesis: 結合地理資訊與深度學習之興趣點推薦系統 Location-aware Deep POI Recommendation System E-mail: chester@iir.csie.ncku.edu.tw |
Graduated at 2017
 | Hong-Yi Kuo Degree: Institute of Computer Science and Information Engineering Master Thesis: 以綜合性計算方法藉由遺傳拷貝數變異探討癌症易患性 E-mail: sonrisa630@iir.csie.ncku.edu.tw |
 | Pei-Ju Lin Degree: Institute of Computer Science and Information Engineering Master Thesis: 基於深度學習建置廣泛性的潛在藥物不良反應預測模型 A Generalized Model for Predicting Potential Adverse Drug Reactions by Deep Neural Network E-mail: lucylin@iir.csie.ncku.edu.tw |
| Chen-En Tsai Degree: Institute of Computer Science and Information Engineering Master Thesis: 利用異質性社群網路作為輔助資訊建立旅館推薦系統 A Study of Using Auxiliary Information from Heterogeneous Social Media for Hotel Recommendation E-mail: yan820712@iir.csie.ncku.edu.tw |
Graduated at 2016
| Yen-Lin Chen Degree: Institute of Computer Science and Information Engineering Master Thesis: 基於智慧型手機利用貝氏網路建立情緒預測及回饋系統 Bayesian Network Based Emotion Prediction and Feedback System for Smartphones E-mail: aegis30263@iir.csie.ncku.edu.tw |
| Ming-Yu Chien Degree: Institute of Computer Science and Information Engineering Master Thesis: 藉由文獻探勘預測合成致死關係 : 大腸癌的個案探討 Prediction of Synthetic Lethality by Literature Mining : Case Studies of Colon Cancer E-mail: imwilly37@iir.csie.ncku.edu.tw |
| Yu-Cheng Shen Degree: Institute of Computer Science and Information Engineering Master Thesis: 基於社群媒體情感分析歸納產品屬性優缺點 Aspect-based Pros and Cons Summarization from Social Media Sentiment Analysis E-mail: ycsheng@iir.csie.ncku.edu.tw |
| Hsin-Hsiung Chang Degree: Institute of Computer Science and Information Engineering Master Thesis: 資料驅動產生醫學研究假說以癌症患者為例 Data-Driven Generation of Medical-Research Hypotheses in Cancer Patients E-mail: hhchang@iir.csie.ncku.edu.tw |
Graduated at 2015
| Pei-Ching Yang Degree: Institute of Computer Science and Information Engineering Ph.D. Thesis: 利用智慧型手機進行活動與情緒辨識應用於健康照護之研究 A Study on Activity and Mood Recognition in Healthcare Settings Using Smartphones E-mail: yang.peiching@iir.csie.ncku.edu.tw |
| Jiun-Huang Ju Degree: Institute of Computer Science and Information Engineering Ph.D. Thesis: 用巨量生醫文獻探勘進行跨文件關聯擷取應用於老藥新用之研究 Large-Scale Biomedical Literature Mining for Cross-Document Relation Extraction toward Drug Repurposing Website:https://sites.google.com/site/jiunhuangju/ E-mail: jujh@iir.csie.ncku.edu.tw |
| Chen-Yi Wang Degree: Institute of Medical Informatics Master Thesis: 基於智慧型裝置建立一套個人化活動 推薦系統 – 以憂鬱症患者為例 A Smartphone-Based Personalized Activity Recommender System for Patients with Depression E-mail: chen_yi@iir.csie.ncku.edu.tw |
| Meng-Che Hsieh Degree: Institute of Computer Science and Information Engineering Master Thesis: 基於隱含狄利克雷分佈之志工活動推薦系統－以銀髮族社群平台為例 LDA-based Volunteer Opportunities Recommendation System – a Case Study in Senior Online Social Network E-mail: kameil120@iir.csie.ncku.edu.tw |
| Wen-Gan Li Degree: Institute of Computer Science and Information Engineering Master Thesis: 支援XML正規表示式查詢之記憶體表示模型 A Fully-Indexing-Enabled Memory Representation Model for Supporting XML Regular Expression Queries E-mail: wengan.li@iir.csie.ncku.edu.tw |
Graduated at 2014
| Wan-Shu Cheng Degree: Institute of Computer Science and Information Engineering Ph.D. Thesis: 應用於癌症之個人醫療預後的全基因體生物標誌組之探勘及檢驗分析 Independent Epigenetic Prognostic Marker Panel Mining and Examining for Cancers Personalized Medicine through Genome-scale Analysis E-mail: amigo@iir.csie.ncku.edu.tw |
| Chia-Chi Chan Degree: Institute of Medical Informatics Master Thesis: 建立一個基於手機操作行為紀錄的負面情緒前偵測系統 An Early Negative Emotion Detection System Based on Smartphone Usage Patterns E-mail: iamfriedchicken@iir.csie.ncku.edu.tw |
| Yue-Ting Wong Degree: Institute of Computer Science and Information Engineering Master Thesis: 自生物醫學文獻中發現疾病-藥物間接關係 進而探討老藥新用 Discovering indirect disease-drug relationships from biomedical literature toward drug repurposing E-mail: out.ytwong@iir.csie.ncku.edu.tw |
Graduated at 2013
 | 林展賢 Degree: Institute of Computer Science and Information Engineering Ph.D. Thesis: 基於酵母菌全基因組分析之表觀遺傳學研究 Epigenetic Analysis for Genome-wide Profiles of Saccharomyces cerevisiae E-mail: eric@iir.csie.ncku.edu.tw |
 | 柯兆軒 Degree: Institute of Medical Informatics Ph.D. Thesis: 生醫文獻訊息之擷取與應用 Effective Acquisition of Biomedical Message from Literature E-mail: chke@iir.csie.ncku.edu.tw |
 | 陳偉銘 Degree: Institute of Computer Science and Information Engineering Ph.D. Thesis: 系統生物學方法應用於高通量全基因組資料之解析 Systems Biology Approaches for Analysis of High-Throughput Genome-wide Data E-mail: weiming.chen@iir.csie.ncku.edu.tw |
 | 陳恭佑 Degree: Institute of Medical Informatics Master Thesis: 基於模糊推論方法推薦潛在運動夥伴 以提升個人運動動機 Increasing Motivation to Exercise : Develop Potential Exercise Friends Recommendation with Fuzzy Inference E-mail: c80825@iir.csie.ncku.edu.tw |
 | 蘇嚮權 Degree: Institute of Computer Science and Information Engineering Master Thesis: 建立一可任意配戴之智慧型手機活動記錄器 A Smartphone-based Daily Activity Monitoring System E-mail: i250832@gmail.com.tw |
Graduated at 2012
 | 蔡正宏 Degree: Institute of Computer Science and Information Engineering Master Thesis: 利用填補雙端定序間隙的方式將定序產生的序列延長以提高基因體組序之完成度 Improving De Novo Genome Assembly by Using Longer Sequences Constructed from Short Paired-end Reads E-mail: tch0407@iir.csie.ncku.edu.tw |
 | 郭玟伶 Degree: Institute of Medical Informatics Master Thesis: 整合智慧型行動裝置之個人化無縫式運動照護系統之開發 Development of Development of A Personalized ersonalized Seamless eamless eamless Exercise Care System by Integrating ntegrating Smart mart Handheld Devices E-mail: wunling@iir.csie.ncku.edu.tw |
Graduated at 2011
 | 劉恆惠 Degree: Institute of Computer Science and Information Engineering Ph.D. Thesis: 智慧型生醫文獻摘要系統之研究 Intelligent Biomedical Information Summarization for Omics Study E-mail: henghui.liu@gmail.com |
 | 林祐丞 Degree: Institute of Computer Science and Information Engineering 碩士 Thesis: 利用文獻探勘建立電子巨噬細胞內之信號傳遞網路 Using Text Mining to Build Signaling Network for Electric Macrophage E-mail: sjorkimo@hotmail.com |
 | 杜璇 Degree: Institute of Medical Informatics Master Thesis: 利用智慧型手機開發活動模式辨識系統 ─ 應用於體重過重者之體能活動量改善 Development of an Activity Pattern Recognition System with Smartphone – Applying to Improve the Physical Activity of Overweight People E-mail: shandu22@gmail.com |
 | 陳建銘 Degree: Institute of Medical Informatics Master Thesis: 以文獻實證及特定組織生物晶片為基礎之癌症微核糖核酸調控元件建構與分析 Identification of cancer-related miRNA regulatory components from evidence-supported literatures and specific tissue expression profiles E-mail: mingpiggy@gmail.com |
 | 葉恆甫 Degree: Institute of Computer Science and Information Engineering Thesis: NPUST：An Efficient Density-Based Clustering Algorithm Using Partition Space Technique E-mail: hengfu@iir.csie.ncku.edu.tw |
Graduated at 2010
 | 林明煒 Degree: Institute of Computer Science and Information Engineering 碩士 Thesis: 運用資訊擷取技術進行醫學文獻評讀以建立臨床實證及搜尋系統 Automating the Process of Critical Appraisal with Information Retrieval Technology to Facilitate the Development of Evidence-Based Medicine and Clinical Search System E-mail: s49356020@gmail.com |
 | 黃翊庭 Degree: Institute of Computer Science and Information Engineering 碩士 Thesis: 利用文句主題資訊檢索技術於生醫文獻進行段落排序與推薦之研究 A Study on Paragraph Ranking and Recommendation by Topic Information Retrieval from Biomedical Literature E-mail: s12015cm@gmail.com |
 | 羅兆呈 Degree: Institute of Medical Informatics Master Thesis: 使用智慧型手機內建之加速度計於動能感知系統之開發與應用 The Development of Activity Recognition System Using the Smartphone with Accelerometer E-mail: allen.cause@gmail.com |
 | 蕭雯伶 Degree: Institute of Medical Informatics Master肄業 Thesis: E-mail: wendy.hsiao1101@gmail.com |
 | 王思博 Degree: Institute of Computer Science and Information Engineering Ph.D.肄業 Thesis: 基於空間關係之彈性影像擷取及挖掘 Flexible Image Retrieval and Mining on Spatial Relations E-mail: spwang@iir.csie.ncku.edu.tw |
Graduated at 2009
| 李宗儒 Degree: Institute of Computer Science and Information Engineering Ph.D. Thesis: 利用系統生物學之分類與演算法分析癌症基因表現網路並預測人類癌症蛋白質交互作用 Systems Biology Approach in Human Cancer Protein Interaction Prediction and Its Application to Cancer Gene Expression Network Analysis E-mail: michaelee0407@gmail.com |
 | 張菀珊 Degree: Institute of Medical Informatics Master Thesis: 以系統化方法從抗藥性與DNA損害反應建構差異表現網路 – 以卵巢癌與非小型細胞肺癌為例 A Systematic Approach to Construct Differential Expression Network during Drug Resistance and DNA Damage Response E-mail: sharechang1011@gmail.com |
 | 黃惠君 Degree: Institute of Computer Science and Information Engineering 碩士 Thesis: 以GSEA分析微型核糖核酸與生物網路中功能角色與系統實作 Gene Set Enrichment Analysis of microRNA Functional Roles in Biological Network and System Implementation E-mail: salvationhuang@gmail.com |
 | 劉志偉 Degree: Institute of Computer Science and Information Engineering Ph.D.肄業 Thesis: KIDBSCAN: 一個有效率的資料分群演算法 KIDBSCAN: A New Efficient Data Clustering Algorithm E-mail: liu.camper@gmail.com |
 | 周鴻儒 Degree: Institute of Computer Science and Information Engineering Ph.D.肄業 Thesis: 以遺傳基因演算法為基礎的符號式回歸引擎及其於全球定位系統之座標轉換上的應用 A GP-Based Symbolic Regression Engine for the Transformation of GPS Coordinates E-mail: gemini.arashi@gmail.com |